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Healthy Blueberry Muffins

Bursting with ripe, sweet, juicy blueberries, these soft and super healthy blueberry muffins are completely delicious!

Easy Vegan Blueberry Muffins

Easy Healthy Blueberry Muffins

Kid Friendly

Whole Grain

Vegan Option

Freezer Friendly

Can Be Oil Free

This secretly healthy blueberry muffin recipe is packed with fresh blueberry flavor and is perfect for a wholesome breakfast, brunch, or anytime snack. The muffins are freezer friendly and great for meal prep!

Also Try These Oatmeal Muffins

Fresh Blueberries

Can I use frozen blueberries?

Yes, just thaw them first. Because frozen berries are so delicate, the muffins will be more purple thanks to the bursting berries, but they taste just as good!

How do I make vegan blueberry muffins?

These low calorie and healthy muffins are naturally egg free and vegan as long as you use a dairy free milk (such as almond milk or oat milk) in the recipe. The baking powder makes them super fluffy – no need for flax eggs!

Girl With Muffins

Blueberry muffin ingredients

The simple recipe calls for just a few basic ingredients, most of which can probably be found in your pantry.

If you want to make fat free muffins, you can sub the oil for applesauce, yogurt, or mashed banana.

I’ve had success using spelt, oat, white (all purpose), or gluten free all purpose flour for gluten free blueberry muffins. I haven’t tried almond or coconut flour in this recipe, but be sure to report back if you try.

(If you’re looking for a healthy muffin recipe with almond flour and no sugar, try these Keto Muffins.)

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Healthy Blueberry Muffin Recipe

How do you serve the muffins?

Eat them plain

Frost with coconut butter or vegan cream cheese

Crumble them into Greek yogurt or on top of oatmeal

Or serve as a healthy dessert – try topping each clean eating blueberry muffin with your favorite jam and coconut whipped cream, for a fun twist on strawberry shortcake!

Leftover Berries? Try This Blueberry Crisp Recipe

Above – Watch the video how to make healthy blueberry muffins!

How To Make The Best Healthy Blueberry Muffins

Recipe adapted from my Banana Muffins Recipe and Blueberry Bread Recipe.

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Healthy Blueberry Muffins

Soft healthy blueberry muffins that are perfect for breakfast or snack.
4.87/5 (15)
Total Time 21 minutes
Yield 12 -14 muffins


  • 1 cup milk of choice
  • 4 tsp white or cider vinegar
  • 1 1/2 tsp pure vanilla extract
  • 3 tbsp oil or almond butter, or mashed banana, yogurt, or applesauce for fat-free
  • 2 cups spelt, white, oat, or gf all purpose flour (for flourless, make these Keto Blueberry Muffins)
  • 4 tsp baking powder
  • 1/2 tsp cinnamon, and optional pinch cardamom
  • 1/2 tsp plus 1/8 tsp salt
  • sugar of choice (see note below)
  • 1 1/4 cup blueberries, fresh or frozen (165g blueberries)


  • For muffins, you only need 1/2 cup sugar for the entire recipe. For blueberry cupcakes, simply increase sugar to 3/4 cup. Xylitol can be used for sugar-free muffins.
    Preheat oven to 350 F. Grease or line a muffin tin. In a large bowl, combine wet ingredients. Stir in remaining ingredients except blueberries. Pour wet into dry, and stir until just evenly mixed. If batter is dry (which might happen if you pack the flour too much, especially if using white), add just a little more milk. Gently stir in berries only until evenly mixed. It’s important to not over-stir, which could break the berries. Pour into the muffin tins and bake 21 minutes. Muffins should look perfectly domed when you take them out. Allow to sit 10 minutes before removing from the tins. If you let them sit–loosely covered–overnight, the liners peel off easily the next day too.
    View Nutrition Facts

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4.87/5 (15)

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Published on May 13, 2020

Meet Katie

Chocolate Covered Katie is one of the top 25 food websites in America, and Katie has been 
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ABC's 5 O’Clock News. Her favorite food is chocolate, and she believes in eating dessert every single day.

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  1. Chelsea says

    Hi Katie, as I am not a vegan, is it possible to replace the vegetable oil with eggs? If so, how many eggs? Thank you for your amazing recipes!

  2. Maya says

    A little confused. I did the math for these muffins (so delicious btw) and I got 123 calories per muffin using vegetable oil, unsweetened almond milk, coconut sugar, and 1/2 whole wheat 1/2 all purpose flour. Maybe I did my math wrong? Which ingredients did you use for your nutrition facts? Still love these though!

    • Anna says

      If you substitute the oil for applesauce the calorie count will be much lower. May also depend on type of flour to!

  3. Charlie says

    I made a batch of each recipe:
    “Healthy Blueberry Muffins – The Classic Recipe” & “Black Bean Brownie”
    Without mentioning anything about the ingredients, I asked my adult nephews this (via text messages):
    “If anyone eats the chocolate thing I made, what’s it like please? Any feedback on the muffin? ”
    22 year old nephew: “Had muffin and brownie, both were great, muffin was better”.
    25 year old nephew: “So it wasn’t a good brownie. More like a bad chocolate cake but I’d still eat them. But not a good recipe for a brownie”.
    I was bad at hiding the Black Bean Taste ? Oops my bad!? I’m Sorry Katie.

    I can’t eat the Brownie for medical reasons.
    The muffins were popular so I will make them for family & friends ?

  4. Isela says

    Delicious! Fluffy and nice low level of sugar.

    Mine didn’t brown for some reason. I left it in the oven an additional 5 minutes to try to brown, but no luck. Still, very nice recipe! Would make again. I followed measurements exactly.

    I used almond milk, white distilled vinegar, 1/2 cup granulated sugar, and melted butter for the “choice of” items.

  5. Rosanna says

    It was so good! Me and my roomate did these muffins yesterday and we couldn’t stop eating it. The taste was really incredible. Thank you so much for the recipe.

  6. Dawn says

    These are magnificent! I used 1/2 white and 1/2 oat flour and the texture was amazing. Definitely add the pinch of cardamom—it gave them that certain something that put them over the top. We loved them and will make them frequently—thanks Katie!

  7. Kathy says

    I hate being “that” person who wants to change things! But . . . I do not use regular flour at all. I’m Paleo. So I’ve got some almond flour, some coconut flour and some tapioca flour. Would you have ANY idea how much of any of these I might just try in making your recipe?? Thanks for any help you can offer.

    • CCK Media Team says

      Hi! Just make the keto blueberry muffins she has linked in the post. They use almond flour. You can use coconut sugar or a different sweetener other than a keto one 🙂

  8. Vicki Hodge says

    I made these in a square pan to save time. This has to be the best recipe ever! It turned out to be so fluffy and delicious. Thank you for the recipe.

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